Evaluation of rice fungal endophytes for biological control of blast disease

Agbowuro, G.O., Afolabi, M.S., Olamiriki, E.F. & Awoyemi, S.O. 2020. Rice blast disease (Magnaporthe oryzae): a menace to rice production and humanity. International Journal of Pathogen Research, 4(3): 32–39.

Aggarwal, R., Tiwari, A.K., Srivastava, K.D. & Singh, D.V. 2004. Role of antibiosis in the biological control of spot blotch (Cochliobolus sativus) of wheat by Chaetomium globosum. Mycopathologia, 157(14): 369–377.

Andargie, M., Congyi, Z., Yun, Y. & Li, J. 2017. Identification and evaluation of potential biocontrol fungal endophytes against Ustilagonoidae virens on rice plant. World Journal of Microbiology and Biotechnology, 33: Article number 120.

Ashajyothi, M., Kumar, A., Sheoran, N., Ganeshan, P., Gogi, R., Subbaiyan, G. & Bhattacharya, R. 2019. Black Pepper (Piper nigrum L.) associated endophytic Pseudomonas putida BP25 alters root phenotype and induces incited by Magnaporthe oryzae. Biological Control, 143: 104181.

Ashwini, C. 2019. A review on Chaetomium globosum is versatile weapons for various plant pathogens. Journal of Pharmocognosy and Phytochemistry, 8(2): 946–949.

Atugala, D.M. & Deshappriya, N. 2015. Effect of endophytic fungi on plant growth and blast disease incidence of two traditional rice varieties. Journal of the National Science Foundation of Sri Lanka, 43(2): 173–187.

Bakman. P.A. & Sikora, R.A. 2008. Endophytes: An emerging tool for biological control. Biological Control, 46(1): 1–3.

Blumenstein, K., Alberectsen, B.R., Martin, J.A., Hultberg, M., Sieber, T.N., Helander, M. & Witzell. J. 2015. Nutritional niche overlap potentiates the use of endophytes in biocontrol of a tree disease. BioControl, 60(5): 655–667.

Carroll, G. 1998. Fungal endophytes in stems and leaves: from latent pathogen to mutualistic symbiont. Ecology, 69: 2–9.

Chou, CH., Casilla, N., Hadi, B., Tanaka, T., Chiba, S. & Sato, I. 2020. Rice blast management in Cambodian rice fields using Trichoderma harzianum and resistant variety. Crop Protection, 135: 104864.

da Silva, C.F., Vitorino, L.C., Soares, M.A. & Souchie, E.L. 2018. Multifunctional potential of endophytic and rhizospheric microbial isolates associated with Butia purpurascens roots for promoting plant growth. Antonie Van Leeuwenhoek, 111: 2157–2174.

Dingle, J. & Mcgee, DA. 2003. Some endophytic fungi reduce the density of pustules of Puccinia recondita f. sp. tritici in wheat. MycologicalResearch, 107: 310–316.

Duczek, L.J. 1997. Biological control of common root rot in barley by Idriella bolleyi. Canadian Journal of Plant Pathology, 19(4): 402–405.

Fisher, P.J. & Petrini, O. 1992. Fungal saprobes and pathogens as endophytes of rice (Oryza sativa L.). New Phytologist, 120(1): 137–143.

Flor, R.J., Chhay, K., Sorn, V., Maat, H. & Hadi, B.A.R. 2018. The Technological Trajectory of Integrated Pest Management for Rice in Cambodia. Sustainability, 10: 1732.

Gdanetz, K. & Trail, F. 2017. The wheat microbiome under four management strategies, and potential for endophytes in disease protection. Phytobiomes, 1(3): 158–168.

Geiser, D.M., Jimenez–Gasco, M., Kang, S., Makalowska, I., Veeraraghavan, N., Ward, T.J., Zhang, N., Kuldau, G.A. & O’Donnell, K. 2004. FUSARIUM–ID v. 1.0: a DNA sequence database for identifying Fusarium. European Journal of Plant Pathology, 110: 473–9.

Glare, T.R. & Moran–Dies, M.E. 2016. Microbial–Based Biopesticides–Methods and Protocols. Springer Protocols, Humana Press, New York, NY. 224 pp.

Gond, S.K., Bergena, M.S., Torresa, M.S. & White, J.F. 2015. Endophytic Bacillus spp. produce antifungal lipopeptides and induce host defense gene expression in maize. Microbiological Research, 17: 79–87.

Hirooka, T. & Ishii, H. 2013. Chemical control of plant disease. Journal of General plant pathology, 79: 390–401.

Javadi, L., Naeimi, SH., Rezaee, S. & Khosravi, V. 2014. Biological control of rice blast disease with native Trichoderma isolates in Mazandaran province. Biocontrol in Plant protection, 2(1): 1–15. (In Persian with English summary)

Knudsen, I.M.B., Hockenhull, J. & Jensen, D.F. 1995. Biocontrol of seedling disease of barley and wheat caused by Fusarium culmorum and Bipolaris sorokiniana: effects of selected fungal antagonists on growth and yield components. Plant Pathology, 44: 467–77.

Kommedehl, T. & Mew, I.C. 1975. Biocontrol of corn root infection in the field by seed treatment with antagonists. Phytopathology, 65(3): 296–300.

Lahlali, R. & Hijri, M. 2010. Screening, identification and evaluation of potential biocontrol fungal endophytes against Rhizoctonia solani AG3 on potato plants. FEMS Microbiology Letters, 311(2): 152–159.

Larran, S., Simon, M.R., Moreno, M.V., Santamarina Siurana, M.P. & Perello, A. 2016. Endophytes from wheat as biocontrol agents against tan spot disease. Biological Control, 92: 17–23.

Larran, S., Perelló, A., Simón, MR. & Moreno, V. 2002. Isolation and analysis of endophytic microorganisms in wheat (Triticum aestivum L.) leaves. World Journal of Microbiology and Biotechnology, 18: 683–686.

Macia–Vicente, J.G., Rosso, L.C., Ciancio, A., Jansson, H.–B. & Lopez–Liorca, L.V. 2009. Colonisation of barly roots by endophytic Fusarium equiseti and Pochonia chlamydosporia: Effects on plant growth and disease. Annals of Applied Biology, 155: 391–401.

Martinez–Arias. C., Macaya–Sanz, D. & Witzell, J. 2018. Enhancement of Populus alba tolerance to Venturia tremulae upon inoculation with endophytes showing in vitro biocontrol potential. European Journal of Plant Pathology, 153(4): 1031–1042.

Marwah, R.G., Fatope, M.O., Deadman, M.L., Al–Magbali, Y.M. & Husband, J. 2007. Musanahol: a new aureonitol –related metabolite from a Chaetomium sp., Tetrahedron, 63(34): 8174–8180.

Mousavi, S.H., Babaee Zad, V., Sharifnabi, B., Tajik Ghanbari, M.A., Massah, A. & Alavi, S.M. 2014. Induction of blast disease resistance in rice plants by endophyte fungus Priformospora indica. Iranian Journal of Plant Pathology, 153(3): 127–129. (In Persian with English summary)

Moya, P., Pedemonte, D., Amengual, S., Franco, M. E.E. & Sisterna. M.N. 2016. Antagonism and modes of action of Chaetomium globosum species group, potential biocontrol agent to barley foliar diseases. The Bulletin of the Botanical Society of Argentina, 51(4): 569–578.

Naik. B.S., Shashikala, J. & Krishnamurthy, Y.L. 2009. Study on the diversity of endophytic communities from rice (Oryza sativa L.) and their antagonistic activities in vitro. Microbiological Research, 164(3): 290–296.

Nassimi. Z. & Taheri, P. 2017. Endophytic fungus Piriformospora indica induced systemic resistance against rice sheath blight via affecting hydrogen peroxide and antioxidants. Biocontrol Science and Technology, 27(2): 252–267.

O'Donnell, K., Kistler, H.C., Cigelnik, E. & Ploetz, R.C. 1998. Multiple evolutionary origins of the fungus causing Panama disease of banana: Concordant evidence from nuclear and mitochondrial gene genealogies. Proceedings of the National Academy of Sciences of the United States of America, 95: 2044–2049.

Padasht Dehkaei, F. & Izadyar, M. 2007. Study on the biological control of rice blast disease in the field conditions. Journal of Agriculture Sciences and Natural Resources, 13: 84–92. (In Persian with English summary)

Pandya, U. & Saraf, M. 2010. Application of Fungi as a Biocontrol Agent and their Biofertilizer Potential in Agriculture. Journal of Advanced Research, 1(1): 90–99.

Paulina, M., Debroa, P., Susana, A., Mario Franco, E.E. & Marina Sisterna, N. 2016. Antagonism and modes of action of Chaetomium globosum species group, potential biocontrol agent of barley foliar diseases. Boletin de la Sociedad Argentina de Botanica, 51(4): 569–578.

Petrovic, T., Burgess, L., Cowie, I., Warren, R. & Harvey, P. 2013. Diversity and fertility of Fusarium sacchari from wild rice (Oryza australiensis) in Northern Australia, and pathogenicity tests with wild rice, rice, sorghum and maize. European Journal of Plant Pathology, 136(4): 773–788.

Pili, N.N., Franka, S.C., Kynd, T., Makumba, B.A., Skilton, R., Mibey, M., Mibey, R.K. & Gheysen. G. 2016. Analysis of fungal endophytes associated with rice roots from irrigated and upland ecosystem in Kenya. Plant and Soil, 405(1–2): 371–380.

Ponnawila, P.V.A.R. & Deshappriya, N. 2014. Investigation of fungal endophytes present in rice varieties Bg 352, Suwandel and Herath Banda. Proceedings 34th annual sessions of Institute of Biology Sri Lanka, 34 (2): 45.

Priyadarshani, C.D.N., Deshappriya, N. & Sandamali, T.G.I. 2018. Effect of fungal endophytes of rice variety LD368 on growth and brown spot disease incidence of rice. Tropical Plant Research, 5(3): 292–302.

Ramesh, N.K., Naeimi, S., Rezaee, S. & Fotouhifar, K.B. 2020. Biological control of rice Bakanae disease caused by Fusarium fujikuroi using some endophytic fungi. Entomology and Phytopathology, 87: 281–296.

Ribot, C. Hirsch, J., Balzergue, S., Tharreau, D., Nottéghem, J.L., Lebrun, M.H. & Morel, J.B. 2008. Susceptibility of rice to the blast fungus, Magnaporthe grisea. Journal of Plant Physiology, 165: 114–124.

Rong, S., Xu, H., Li, L., Chen, R., Gao, X. & Xu, ZH. 2020. Antifungal activity of endophytic Bacillus safensis B21 and its potential application as a biopesticide to control rice blast. Pesticide Biochemistry and Physiology, 162: 69–77.

Sakulkoo, W., Oses–Ruiz, M., Oliveira, E., Soanes, D.M., Littlejohn, G.R., Hacker, C., Correia, A., Valent, B. & Talbot, N. 2018. A single fungal MAP kinase controls plant cell–to–cell invasion by the rice blast fungus. Plant Science, 359: 1399–1403.

Schulz, B. & Boyle, CH. 2005. The endophytic continuum. Mycological Research, 109(6): 661–686.

Shadmani, L., Jamali, S. & Fatemi, A. 2018. Biocontrol activity of endophytic fungus of barley, Microdochium bolleyi, against Gaeumannomyces graminis var. tritici. Mycologia Iranica, 5(1):7–14.

Sieber, T.N. & Grunig, C.R. 2013. Fungal root endophytes. In: Eshel A., Beeckman T. (eds): Plant Roots –The Hidden Half, CRC Press, Taylor & Francis Group, Boca Raton, FL, USA, 38(1): 38–49.

Skamnioti, P. & Gurr, S.J. 2009. Against the grain: safeguarding rice from rice blast disease. Trends Biotechnology, 27: 141–150.

Su, Z–Z., Mao, L–J., Li, N., Fenf, X–X., Yuan, Z–L., Wang, L–W., Lin, F–C. & Zhang, C–L. 2013. Evidence for Biotrophic Lifestyle and Biocontrol Potential of Dark Septate Endophyte Harpophora oryzae to Rice Blast Disease. Plos one, 8(4):61332.

Suada, I.K., Suhartini, D.M.W.Y., Sunariasih, N.P.L., Wirawan, I.P.W., Chun, K.W., Cha, J.Y. & Ohga, S. 2012. Ability of endophytic fungi isolated from rice to inhibit Pyricularia oryzae – induced rice blast in Indonesia, Journal of the Faculty of Agriculture, Kyushu University, 57(1): 51–53.

Sun, X., Ding, Q., Hyde, K.D. & Guo, L.D. 2012. Community structure and preference of endophytic fungi of three woody plants in a mixed forest. Fungal Ecology, 5(5): 624–632.

Talbot, N.J. 2003. On the trail of a cereal killer: Exploring the biology of Magnaporthe grisea. Annual Review of Microbiology, 57: 177–202.

Tarafdar, J.C. & Gharu, A. 2006. Mobilization of organic and poorly soluble phosphates by Chaetomium globosum. Applied Soil Ecology, 33(3): 273–283.

Tian, X.L., Cao, L.X., Tan, H.M., Zeng, Q.G., Jia, Y.Y., Han, W.Q. & Zhou, S.N. 2004. Study on the communities of endophytic fungi and endophytic Actinomycetes from rice and their antipathogenic activies in vitro, World Journal of Microbiology & Biotechnoligy, 20(3): 303–309.

Tomilovo, O.G. & Shternashi, M.V. 2006. The effect of a preparation from Chaetomium fungi on the growth of phytopathogenic fungi. Applied Biochemistry and Microbiology, 42(1): 76–80.

Valino, M., Greppi, D., Novero, M., Bonfante, P. & Lupotto, E. 2009. Rice root colonisation by mycorrhizal and endophytic fungi in aerobic soil. Annals of Applied Biology, 154(2): 195–204.

Van Wees, S. C., Van der Ent, S. & Pieterse, C. M. J. 2008. Plant immune responses triggered by beneficial microbes. Current Opinion in Plant Biology, 11: 443–438.

Wani, Z.A., Ashraf, N., Mohiuddin, T. & Riyaz–ul–Hassan, S. 2015. Plant–endophyte symbiosis, an ecological perspective. Applied Microbiology and Biotechnology, 99(7): 2955–2965.

White, T.J., Bruns, T., Lee, S. & Taylor, J.V. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis, M.A., Gelfand, D.H., Sninsky, J.J., White, T.J. (eds.), and PCR Protocols: A Guide to Methods and Applications. Academic Press, New York, 315–322.

Wijesooriya, W. & Deshappriya, N. 2016. An inoculum of endophytic fungi for improved growth of a traditional rice variety in Sri Lanka. Tropical Plant Research, 3(3): 470–480.

Wilson, R.A. & Talbot, N.J. 2009. Under pressure: Investigating the biology of plant infection by Magnaporthe oryzae. Nature Reviews Microbiology, 7(3):185–95.

Yuan, Z.L., Zhang, C.L., LIN, F.U.C. & Kubicek, C.P. 2010. Identity, Diversity, and Molecular Phylogeny of the Endophytic Mycobiota in the Roots of Rare Wild Rice (Oryzae granulate) from a Nature Reserve in Yunnan, China. Applied and Enviromental Microbiology, 76(5): 1642–1652.

Yuan, Z.L., SU, Z.Z., Mao, L.J., Peng, Y.Q., Yang, G.M., Lin, F.C. & Zhang, C.L. 2011. Distinctive endophytic fungal assemblage in stems of wild rice (Oryza granulata) in China with special reference to two species of Muscodor (Xylarriaceae). The Journal of Microbiology, 49(1): 15–23.

Yue, H–M., Wang, M., Gong, W–F. & Zhang, L.Q. 2018. The screening and identification of the biological control fungi Chaetomium spp. Against Wheat common root rot. FEMS Microbiology Letters, 365(22): 1–6.

Zakaria, L., Yaakop, A.S., Salleh, B. & Zakaria, M. 2010. Endophytic fungi from paddy. Tropical Life Science Research, 21(1): 101–107.

Zhang, H. & Yang, Q. 2007. Expressed sequence tags based identification of genes in the biocontrol agent Chaetomium cupreum. Applied Microbiology and Biotechnology, 74(3): 650–658.

Zhong, S. & Steffenson, B.J. 2001. Virulence and molecular diversity in Cochliobolus sativus. Phytopathology, 91(5): 469–476.