| تعداد نشریات | 286 |
| تعداد نشریات سازمان | 84 |
| تعداد شماره‌ها | 2,846 |
| تعداد مقالات | 32,300 |
| تعداد مشاهده مقاله | 41,387,091 |
| تعداد دریافت فایل اصل مقاله | 18,562,169 |
New records and hosts for Exserohilum and Pyrenophora species in Iran | ||
| Rostaniha | ||
| مقاله 8، دوره 21، شماره 1 - شماره پیاپی 59، آذر 2020، صفحه 96-108 اصل مقاله (427.22 K) | ||
| نوع مقاله: Research Paper | ||
| شناسه دیجیتال (DOI): 10.22092/botany.2020.342375.1196 | ||
| نویسندگان | ||
| Zeinab Heidarian1؛ Mahdi Arzanlou* 2؛ Abdollah Ahmadpour3 | ||
| 1PhD Student (graduated), Plant Protection Department, Faculty of Agriculture, University of Tabriz, Tabriz, Iran | ||
| 2Prof., Plant Protection Department, Faculty of Agriculture, University of Tabriz, Tabriz, Iran | ||
| 3Assistant Prof., Higher Education Center Shahid Bakeri Miyandoab, Urmia University, Urmia, Iran | ||
| چکیده | ||
| In a taxonomic study of Exserohilum and Pyrenophora species in Iran, infected plant materials were obtained from different provinces (West and East Azerbaijan, Guilan, Mazandaran, Isfahan and Khuzestan), during the years 2013–16. A total number of fourty eight isolates including 26 Exserohilum and 22 Pyrenophora isolates were obtained from various plants. The internal transcribed spacer (ITS) region and GPDH (Glyceraldehyde-3-phosphate dehydrogenase) gene were amplified and sequenced for representative isolates. Based on a combination of morphological characteristics and sequence data, six species of Exserohilum viz., E. monoceras (three isolates), E. oryzicola (five isolates), E. rostratum (12 isolates), E. turcicum (six isolates),and Pyrenophora viz., P. dictyoides (one isolate) P. graminea (19 isolates), and P. lolii (two isolates) were identified. Among the species, E. oryzicola is new species for the mycobiota of Iran. Full description and illustration for the new species are provided herewith. New hosts are also reported for E. rostratum,and P. lolii. | ||
| کلیدواژه‌ها | ||
| GPDH؛ ITS؛ morphology؛ phylogeny؛ taxonomy | ||
| عنوان مقاله [English] | ||
| گزارش‌ها و میزبان‌های جدید از گونه‌های Exserohilum و Pyrenophora در ایران | ||
| نویسندگان [English] | ||
| زینب حیدریان1؛ مهدی ارزنلو2؛ عبدالله احمدپور3 | ||
| 1فارغ‌التحصیل دکتری گروه گیاه‌پزشکی، دانشکده کشاورزی، دانشگاه تبریز، تبریز، ایران | ||
| 2استاد گروه گیاه‌پزشکی، دانشکده کشاورزی، دانشگاه تبریز، تبریز، ایران | ||
| 3استادیار مرکز آموزش عالی شهید باکری، میاندوآب، دانشگاه ارومیه، ارومیه، ایران | ||
| چکیده [English] | ||
| در راستای تاکسونومی گونه‌های جنس‌های Exserohilum و Pyrenophora، نمونه‌های برگی آلوده گیاهی طی سال‌های 94-1392 از استان‌های مختلف کشور (آذربایجان غربی و شرقی، مازندران، گیلان، اصفهان و خوزستان) جمع‌آوری گردید. تعداد 48 جدایه از جنس‌های Exserohilum (26 جدایه) و Pyrenophora (22 جدایه) از گونه‌های مختلف گیاهی جداسازی گردید. جدایه‌ها براساس ویژگی‌های ریخت‌شناختی و توالی‌یابی ناحیه rDNA ITS1-5.8S-ITS2 و ژن GPDH (Glyceraldehyde-3-phosphatedehydrogenase) شناسایی شدند. براساس داده‌های ریخت‌شناختی و مولکولی، چهار گونه از جنس Exserohilum شامل E. monoceras (سه جدایه)، E. oryzicola (پنج جدایه)، E. rostratum (12 جدایه)، E. turcicum (شش جدایه) و سه گونه از جنس Pyrenophora شامل P. graminea (19 جدایه)، P.dictyoides (یک جدایه) و P. lolii (دو جدایه) شناسایی شدند. گزارش گونه E. oryzicola برای مایکوبویتای ایران جدید می‌باشد. شرح کامل به همراه تصاویر برای گونه جدید و همچنین میزبان‌های جدید برای دو گونه E. rostratumوP. loliiمعرفی می‌گردد. | ||
| کلیدواژه‌ها [English] | ||
| تاکسونومی, ریخت‌شناسی, فیلوژنی, ITS, GPDH | ||
| مراجع | ||
|
Ahmadpour, A., Donyadoost-Chelan, M., Heidarian, Z. & Javan-Nikkhah, M. 2011. New species of Bipolaris and Curvularia on grass species in Iran. Rostaniha 12: 39–49.
Ahmadpour, A., Donyadoost-Chelan, M., Heidarian, Z. & Javan-Nikkhah, M. 2012a. New species of Bipolaris and Curvularia on grass species in Iran. Rostaniha 13: 69–82.
Ahmadpour, A., Heidarian, Z., Donyadoost-Chelan, M., Javan-Nikkhah, M. & Tsukiboshi, T. 2012b. A new species of Bipolaris from Iran. Mycotaxon 120: 301–307.
Ahmadpour, A., Heidarian, Z., Karami S., Pordel, A., Jabbarifar, S.M., Tsukiboshi, T., Zhang, M. & Javan-Nikkhah, M. 2013. New species of Bipolaris and Curvularia on poaceous plants in Iran (3). Rostaniha 14: 216–228.
Alcorn, J.L. 1982a. New Cochliobolus and Bipolaris species. Mycotaxon 15: 1–19.
Alcorn, J.L. 1982b. Ovaricolous Bipolaris species on Sporobolus and other grasses. Mycotaxon 15: 20–48. Alcorn, J.L. 1983. Generic concepts in Drechslera, Bipolaris and Exserohilum. Mycotaxon 17: 1–86.
Alcorn, J.L. 1988. The taxonomy of Helminthosporium species. Annual Review of Phytopathology 26: 37–56.
Alcorn, J.L. 1991. New combinations and synonymy in Bipolaris and Curvularia, and a new species of Exserohilum. Mycotaxon 41: 329–343.
Altschul, S.F., Gish, W., Miller, W., Myers, E.W. & Lipman, D.J. 1990. Basic local alignment search tool. Journal of Molecular Biology 215: 403–410.
Ariyawansa, H.A., Kang, J.C., Alias, S.A., Chukeatirote, E. & Hyde, K.D. 2014. Pyrenophora. Mycosphere 5: 351–362.
Berbee, M.L., Pirseyedi, M. & Hubbard, S. 1999. Cochliobolus phylogenetics and the origin of known, highly virulent pathogens, inferred from ITS and glyceraldehyde-3-phosphate dehydrogenase gene sequences. Mycologia 91: 964–977.
Ellis, M.B. 1971. Dematiaceous hyphomycetes. Commonwealth Mycological Institute, Kew, England, 608 pp.
Ellis, M.B. 1976. More Dematiaceous Hyphomycetes. Commonwealth Mycological Institute, Kew, England, 507 pp.
Ershad, D. 2009. Fungi of Iran. 3rd ed. Agricultural Research. Education & Extention Organization, Publication No. 10. Tehran, Iran, 531 pp.
Farr, D.F. & Rossman, A.Y. 2020. Fungal Databases, Systematic Mycology and Microbiology Laboratory, ARS, USDA. Retrieved March 13. From http://nt.arsgrin.gov/fungaldatabases.
Heidarian, Z., Arzanlou, M., Babaei-Ahari, A. & Ahmadpour, A. 2016. Phenotypic and molecular characterization of Exserohilum species from Iran. Nova Hedwigia 103: 327–338.
Hernandez-Restrepo, M., Madrid, H., Tan, Y.P., Cunha, K.C.Da., Gené, J., Guarro, J. & Crous, P.W. 2018. Multi-locus phylogeny and taxonomy of Exserohilum. Persoonia 41: 71–108.
Ito, S. 1930. Study on some new ascigenous stages of the Helminthosporium parasitic on cereal. Proceedings of the Imperial Academy 6: 355–359.
Katoh, K., Rozewicki, J. & Yamada, K.D. 2019. MAFFT online service: multiple sequence alignment, interactive sequence choice and visualization. Briefings in Bioinformatics20: 1160–1166.
Kearse, M., Moir, R., Wilson, A., Stones-Havas, S., Cheung, M., Sturrock, S., Buxton, S., Cooper, A., Markowitz, S., Duran, C., Thierer, T., Ashton, B., Mentjies, P. & Drummond, A. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28: 1647–1649.
Leonard, K.J. & Suggs, E.G. 1974. Setosphaeria prolata, the ascigerous state of Exserohilum prolatum. Mycologia 66: 197–281.
Luttrell, E.S. 1963. Taxonomic criteria in Helminthosporium. Mycologia 55: 643–674.
Luttrell, E.S. 1964. Systematics of Helminthosporium and related genera. Mycologia 56: 119–132.
Luttrell, E.S. 1977. Correlations between conidial and ascigerous state characters in Pyrenophora, CochlioboIus and Setosphaeria. Revue de mycoloie 41: 271–279.
Manamgoda, D.S., Cai, L., Bahkali, A.H., Chukeatirote, E. & Hyde, K.D. 2011. Cochliobolus: an overview and current status of species. Fungal Diversity 51: 3–42.
Manamgoda, D.S., Cai, L., McKenzie, E.H.C., Crous, P.W., Madrid, H., Chukeatirote, E., Shivas, R.G., Tan, Y.P. & Hyde, K.D. 2012. A phylogenetic and taxonomic re-evaluation of the Bipolaris-Cochliobolus-Curvularia complex. Fungal Diversity 12: 131–144.
Manamgoda, D.S., Rossman, A.Y., Castlebury, L.A., Chukeatirote, E. & Hyde, K.D. 2015. A taxonomic and phylogenetic re-appraisal of the genus Curvularia (Pleosporaceae): human and plant pathogens. Phytotaxa 212: 175–198.
Manamgoda, D.S., Rossman, A.Y., Castlebury, L.A., Crous, P.W., Madrid, H., Chukeatirote, E. & Hyde, K.D. 2014. The genus Bipolaris. Studies in Mycology 79: 221–288.
Marin-Felix, Y., Hernández-Restrepo, M., Iturrieta-González, I. Garcia, D., Gene, J., Groenewald, J.Z., Cai, L., Chen, Q., Quaedvlieg, W., Schumacher, R.K., Taylor, P.W.J., Ambers, C., Bonthond, G., Edwards, J., Krueger-Hadfield, S.A., Luangsa-ard, J.J., Morton, L., Moslemi, A., Sandoval-Denis, M., Tan, Y.P., Thangavel, R., Vaghefi, N., Cheewangkoon, R. & Crous, P.W. 2019. Genera of phytopathogenic fungi: GOPHY 3. Studies in Mycology 94: 1–124.
Nisikado, Y. 1929. Studies on the Helminthosporium diseases of gramineae in Japan. Berichte Des Ohara Institute Landwirtschaftliche Forschungen 4: 111–126.
Nylander, J.A.A. 2004. MrModeltest v. 2. program distributed by the author. Evolutionary Biology Centre, Uppsala University, Sweden.
Page, R.D.M. 1996. Treeview: An application to display phylogenetic trees on personal computers. Computer Applications in the Biosciences 12: 357–35.
Ronquist, F. & Huelsenbeck, J.P. 2003. Mrbayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–1574.
Rossman, A.Y., Crous, P.W., Hyde, K.D., Hawksworth, D.L., Aptroot, A., Bezerra, J.L., Bhat, J.D., Boehm, E., Braun, U., Boonmee, S., Camporesi, E., Chomnunti, P., Dai, D., D'souza, M.J., Dissanayake, A., Jones, E.B.G., Groenewald, J.Z., Hernández-Restrepo, M., Hongsanan, S., Jaklitsch, W.M., Jayawardena, R., Jing, L.W., Kirk, P.M., Lawrey, J.D., Mapook, A., McKenzie, E.H.C., Monkai, J., Phillips, A.J.L., Phookamsak, R., Raja, H.A., Seifert, K.A., Senanayake, I., Slippers, B., Suetrong, S., Tanaka, K., Taylor, J.E., Thambugala, K.M., Tian, Q., Tibpromma, S., Wanasinghe, D.N., Wijayawardene, N.N., Wikee, S., Woudenberg, J.H.C., Wu, H., Yan, J., Yang, T. & Zhang, Y. 2015. Recommended names for pleomorphic genera in Dothideomycetes. IMA Fungus 6: 507–523.
Shoemaker, R.A. 1959. Nomenclature of Drechslera and Bipolaris, grass parasites segregated from Helminthosporium. Canadian Journal of Botany 37: 879–887.
Shoemaker, R.A. 1966. A pleomorphic parasite of cereal seeds, Pyrenophora semeniperda. Canadian Journal of Botany 44: 1451–56.
Sivanesan, A. 1987. Graminicolous species of Bipolaris, Curvularia, Drechslera, Exserohilum and their teleomorphs. CABI International Mycological Institute. Mycological Paper 158, 261 pp.
Swofford, D.L. 2002. PAUP*. Phylogenetic analysis using parsimony (*and other methods). Sinauer, Sunderland.
Vasighzadeh, A., Sharifnabi, B. & Javan-Nikkhah, M. 2020. Pyrenophora lolii, new species for Iranian mycobiota. Mycologia Iranica (In Press).
White, T.J., Bruns, T., Lee, S.B. & Taylor, J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. Pp. 315–322. In: Gelfand, M., Sninsky, D. & White, T. (eds). PCR protocols: a guide to methods and applications. Academic, San Diego, California.
Zhang, G. & Berbee, M.L. 2001. Pyrenophora phylogenetics inferred from ITS and glyceradehyde-3-phosphate dehydrogenase gene sequences. Mycologia 93: 1048–1063.
Zhang, W. & Watson, A.K. 1997. Efficacy of Exserohilum monoceras for the control of Echinochloa species in rice (Oryza sativa L.). Weed Science 45: 144–150.
Zhang, W. & Watson, A.K. 2000. Isolation and partial characterization of phytotoxins produced by Exserohilum monoceras, a potential bioherbicide for control of Echinochloa species. Proceedings of the Xth International Symposium on Biological Control of Weeds. Montana State University. Bozeman, Montana USA, Pp. 125–130.
Zhang, W., Moody, K. & Watson, A.K. 1996. Response of Echinochloa species and rice (Oryza sativa L.) to indigenous pathogenic fungi. Plant Disease 80: 1053–1058. | ||
|
آمار تعداد مشاهده مقاله: 955 تعداد دریافت فایل اصل مقاله: 813 |
||